Gastroenterology Billing

● GI & Hepatology Billing Experts
Artboard 422
HIPAA Compliant Billing
Mental Health Parity Expertise
All Major Payers Accepted
DSM-5 & ICD-10 Coding Specialists
No Long-Term Contracts
HIPAA Compliant Billing
Mental Health Parity Expertise
All Major Payers Accepted
DSM-5 & ICD-10 Coding Specialists
No Long-Term Contracts

Specialized Gastroenterology Billing Services for High-Volume GI Practices

GI billing is high-stakes, high-volume, and full of distinctions that matter financially. Whether a colonoscopy is screening or diagnostic determines the patient’s cost-sharing on every single case. Whether a polypectomy add-on code is applied determines whether you collect the full value of a therapeutic procedure. Theiatrics manages every distinction correctly across your entire case volume.

GI Services Theiatrics Bills For

  • βœ“ Screening and diagnostic colonoscopy billing
  • βœ“ Polypectomy and biopsy add-on code billing
  • βœ“ Upper endoscopy (EGD) and intervention billing
  • βœ“ ERCP with therapeutic add-on codes
  • βœ“ Capsule endoscopy and enteroscopy billing
  • βœ“ Flexible sigmoidoscopy billing
  • βœ“ Anorectal procedure billing (anoscopy, hemorrhoid treatment)
  • βœ“ Liver biopsy and hepatology procedure billing
  • βœ“ IBD biologics infusion billing (J-codes and administration)
  • βœ“ Motility study billing (manometry, pH monitoring)
  • βœ“ GI office visit and chronic disease management billing
  • βœ“ Infusion therapy billing for GI conditions

⚠️ Screening vs. Diagnostic: The #1 GI Billing Decision

The coding distinction between screening and diagnostic colonoscopy affects both your reimbursement and your patient’s cost-sharing on every single colonoscopy claim. Getting it wrong costs money on both sides. Theiatrics applies the correct code based on the indication, payer, and whether a therapeutic intervention was performed during the same session.

Optimize Operations for Maximum Efficiency

Contact us to explore how our consulting can position your business as a frontrunner.

Credentialing Section
Understanding the Specialty

What Makes Gastroenterology Billing Services Uniquely Demanding?

Gastroenterology is one of the highest-volume procedure specialties in outpatient medicine, and GI billing carries a level of consequence per claim that is higher than most. A colonoscopy takes 20 to 45 minutes to perform. The billing decision around whether it is coded as screening or diagnostic, and whether polypectomy add-on codes are correctly applied, can change the reimbursement amount by hundreds of dollars and the patient's cost-sharing by thousands. For a GI practice performing 100 colonoscopies per month, systematic errors in any of these coding decisions compound into significant annual revenue loss or compliance exposure.

The screening versus diagnostic colonoscopy distinction is the most financially significant billing decision in all of GI. For Medicare patients, a screening colonoscopy that finds and removes a polyp should be billed with a modifier that preserves the screening benefit and eliminates the patient's cost-sharing for the therapeutic portion. For commercial payers, policies on this scenario vary significantly and have been changing as federal regulations evolve. Applying the wrong approach for any payer reduces reimbursement and can create patient satisfaction issues when unexpected bills arrive.

Endoscopy add-on codes are the second most impactful billing opportunity in GI. When a gastroenterologist removes a polyp during a colonoscopy, the polypectomy must be billed in addition to the base colonoscopy code using the appropriate add-on code based on the removal technique. Failing to add these codes is the most common source of revenue leakage in high-volume GI practices. The same principle applies to upper endoscopy β€” biopsies and other interventions performed during an EGD require add-on codes that are frequently omitted.

Theiatrics brings the GI-specific billing expertise to manage every one of these decisions correctly across your entire procedure volume, from straightforward screening colonoscopies to complex ERCP cases and IBD biologics infusions.

Optimize Operations for Maximum Efficiency

Contact us to explore how our consulting can position your business as a frontrunner.

98%
First-pass claim acceptance rate
15-21
Average days to reimbursement
30%
Average revenue increase for new clients
100%
HIPAA compliant β€” always
CRITICAL BILLING DISTINCTION

Screening vs. Diagnostic Colonoscopy: The Distinction That Drives GI Revenue

This is the single most financially impactful coding decision in GI billing. The code used determines the patient’s cost-sharing and the amount the practice is reimbursed, and the rules differ between Medicare and commercial payers.
πŸ”Ž Screening

Screening Colonoscopy

Performed on an asymptomatic patient as a preventive service to detect colon cancer or precancerous lesions. The patient has no symptoms and no recent positive non-invasive test result. For Medicare, a screening colonoscopy that converts to a therapeutic procedure (polyp removal) uses modifier PT on the therapeutic code to preserve the screening benefit.

G0121
G0105
45378 + PT
🩺 Diagnostic

Diagnostic Colonoscopy

Performed because the patient has GI symptoms, a positive stool DNA or FIT test result, a personal history of polyps or colorectal cancer, or a family history that increases their risk. Diagnostic colonoscopies are subject to standard patient cost-sharing (deductible and coinsurance) rather than the reduced or zero cost-sharing that applies to preventive screenings.

45378
45379-45388

When a screening finds a polyp: For Medicare patients, if a screening colonoscopy requires polypectomy, the claim is billed with the therapeutic code (such as 45385 for snare polypectomy) rather than the base colonoscopy code, with modifier PT appended to indicate the procedure began as a screening. This preserves the patient’s waived cost-sharing for Medicare. For commercial payers, the policy on this scenario varies by plan and has been evolving under federal guidance β€” Theiatrics applies the correct payer-specific approach for every case in your practice.

CPT CODE REFERENCE

Key Gastroenterology CPT Code Families We Work With Daily

Our GI billing specialists know the full range of endoscopy, procedural, and management CPT codes across every GI service type, including the add-on codes that practices most frequently miss.

Colonoscopy

45378
Colonoscopy, diagnostic, with or without biopsy
45380
Colonoscopy with biopsy, single or multiple
45385
Colonoscopy with snare polypectomy
45384
Colonoscopy with hot biopsy forceps removal
45388
Colonoscopy with ablation of tumor, polyp, or lesion

Upper Endoscopy (EGD)

43239
EGD with biopsy, single or multiple
43249
EGD with esophageal dilation, balloon
43255
EGD with control of bleeding, any method
43257
EGD with delivery of thermal energy to esophagus and stomach
43270
EGD with ablation of tumor, polyp, or lesion

ERCP

43260
ERCP, diagnostic, including collection of specimen
43262
ERCP with sphincterotomy or papillotomy
43264
ERCP with removal of calculi from biliary or pancreatic ducts
43274
ERCP with placement of endoscopic stent into biliary duct
43277
ERCP with balloon dilation of biliary or pancreatic duct

Capsule & Enteroscopy

91110
Capsule endoscopy, small intestinal imaging
91111
Capsule endoscopy, esophageal imaging
44360
Small intestinal endoscopy, with or without biopsy
44366
Small intestinal endoscopy with control of bleeding
44369
Small intestinal endoscopy with ablation of tumor or polyp

Anorectal & Other GI

46600
Anoscopy, diagnostic, with or without biopsy
46930
Destruction of internal hemorrhoids, thermal energy
47000
Liver biopsy, percutaneous
43762
Replacement of gastrostomy tube, direct access
91020
Gastric motility (manometric) study

GI Infusion & E&M

96413
Infusion therapy, initial, up to 1 hour
96415
Infusion therapy, each additional hour
99213
Office visit, established patient, low-moderate complexity
99214
Office visit, established patient, moderate complexity
IBD biologics: J1745 (infliximab), J3380 (vedolizumab), J3357 (ustekinumab)
WHAT WE HANDLE

Our Complete Gastroenterology Billing Services

From screening versus diagnostic coding through endoscopy add-on capture, ERCP therapeutic coding, IBD biologics authorization, and final AR resolution, Theiatrics manages every step of the GI revenue cycle.
πŸ”

Screening vs. Diagnostic Colonoscopy Coding

We apply the correct screening code (G0121, G0105) or diagnostic code (45378) based on the documented indication, and apply modifier PT for Medicare when a screening converts to a therapeutic procedure, preserving the patient’s preventive benefit.

βž•

Polypectomy & Endoscopy Add-On Billing

We capture every applicable add-on code when biopsies, polypectomies, ablations, or other interventions are performed during colonoscopy or EGD. The removal technique determines which add-on code applies, and we select it from the procedure documentation, not from a default assumption.

πŸ§ͺ

ERCP Therapeutic Code Stacking

We bill the base ERCP code plus all applicable therapeutic add-on codes for sphincterotomy, stone extraction, stent placement, balloon dilation, and other interventions documented in the operative record, capturing the full value of complex ERCP cases.

πŸ’Š

IBD Biologics Billing & Authorization

We manage J-code billing for infliximab, vedolizumab, ustekinumab, ozanimod, and other IBD therapies alongside infusion administration codes, with prior authorization requests documenting diagnosis, disease severity, and step therapy history for each payer.

πŸ”

Prior Authorization Management

We obtain prior authorizations for capsule endoscopy, IBD biologics, and other services requiring payer approval, tracking authorization expiration and renewals for ongoing therapy patients to ensure no session is administered without confirmed coverage.

β˜‘οΈ

Eligibility & Benefits Verification

We verify insurance eligibility and GI-specific procedure coverage before each scheduled procedure, confirming preventive versus diagnostic coverage rules, deductible status, and any payer-specific requirements that affect how the colonoscopy or endoscopy should be billed.

🚫

Denial Management & Appeals

When a claim is denied, we identify the root cause, correct the issue, and resubmit within 48 hours. For screening reclassification denials where payers attempt to recode a screening as diagnostic, we prepare appeals citing the applicable federal and payer-specific coverage rules.

πŸ’°

AR Follow-Up & Collections

We work all unpaid and underpaid GI claims systematically, with particular attention to high-dollar ERCP, therapeutic colonoscopy, and IBD infusion claims where payment delays have the greatest cash flow impact. No aging account is left without active follow-up.

πŸ“Š

Revenue Cycle Reporting

You receive regular reports on collection rates by procedure type, screening versus diagnostic code distribution, denial root cause analysis, add-on code capture rates, and IBD biologics authorization performance so your practice has complete financial visibility.

HOW IT WORKS

Our Gastroenterology Billing Process

A structured workflow built around the high-volume, indication-sensitive requirements of GI billing from scheduling through final payment.
1

Eligibility & Indication Review

We verify coverage and determine the correct billing pathway (screening vs. diagnostic) based on the documented indication before each procedure.

2

Procedure Documentation Review

Procedure notes are reviewed to identify all interventions performed, including polypectomy technique and ERCP maneuvers, before coding begins.

3

Code Assignment with Add-Ons

Base procedure codes plus all applicable add-on codes are assigned based on what was documented, with correct modifiers for screening conversions.

4

Claim Scrubbing & Submission

Every claim is reviewed for NCCI compliance, bundling conflicts, and payer-specific requirements before electronic submission with tracking through adjudication.

4

Payment Review & Denial Resolution

Payments are posted and verified. Denied claims are worked within 48 hours and all AR is followed through to resolution or correct adjustment.

GI SERVICE COVERAGE

Gastroenterology Billing Across All GI Subspecialties and Service Types

Our team handles billing for the full spectrum of GI services, from routine preventive endoscopy to complex interventional procedures and chronic disease biologics management.
πŸ”­

Colonoscopy

Screening and diagnostic colonoscopy billing with polypectomy, biopsy, and ablation add-ons, and modifier PT for Medicare screening conversions.

45378 45385 G0121
🫁

Upper Endoscopy

EGD billing for diagnostic and therapeutic upper endoscopy with biopsy, dilation, hemostasis, and ablation add-on codes based on procedure documentation.

43239 43249 43255
πŸ§ͺ

ERCP

Complex ERCP billing with all applicable therapeutic add-ons for sphincterotomy, stone extraction, stent placement, and balloon dilation documented in the operative report.

43260 43262 43264
πŸ’Š

IBD Management

Crohn’s disease and ulcerative colitis biologics billing including infliximab, vedolizumab, and ustekinumab infusions with step therapy prior authorization.

J1745 J3380 96413
πŸ«€

Hepatology

Liver biopsy, hepatitis C treatment monitoring, cirrhosis management visits, and chronic liver disease follow-up billing for combined GI and hepatology practices.

47000 99214 99215
πŸ“·

Capsule Endoscopy

Capsule endoscopy billing for small bowel and esophageal imaging with prior authorization management and professional versus technical component billing.

91110 91111
🧻

Anorectal

Anoscopy, hemorrhoid treatment, flexible sigmoidoscopy, and anorectal manometry billing with correct anatomical site and intervention-specific code selection.

46600 46930 45330
βš™οΈ

Motility Studies

Esophageal and gastric motility study billing including manometry, pH monitoring, and impedance testing for dysmotility and reflux evaluation.

91020 91034 91037
COMMON PAIN POINTS

Gastroenterology Billing Challenges We Solve Every Day

These are the billing problems GI practices encounter most consistently. Our team prevents them before submission and resolves them within 48 hours when they arise.
πŸ”Ž

Screening vs. Diagnostic Miscoding

Billing a screening colonoscopy as diagnostic, or failing to apply modifier PT when a Medicare screening converts to therapeutic, affects both reimbursement and patient cost-sharing on every single colonoscopy claim. For a high-volume GI practice, systematic errors here compound into significant annual revenue loss and patient billing complaints.

How we help: We review each colonoscopy’s documented indication before coding, applying the correct screening code or modifier PT for Medicare conversions, and applying the correct payer-specific approach for commercial plans where the rules differ.

βž•

Missing Polypectomy Add-On Codes

When a polyp is removed during a colonoscopy, the polypectomy must be billed as an add-on to the base colonoscopy code. Many high-volume GI practices either omit these add-on codes entirely or apply the wrong technique-based code (snare vs. cold biopsy vs. hot biopsy), resulting in systematic underbilling on every therapeutic case.

How we help: We review the removal technique documented in every colonoscopy procedure note and apply the correct add-on code (45380, 45384, 45385, or 45388) based on what was documented, ensuring the full value of every therapeutic case is captured.

πŸ§ͺ

Incomplete ERCP Therapeutic Coding

ERCP is one of the highest-value procedures in GI, and it routinely involves multiple therapeutic maneuvers beyond the base diagnostic code. Each additional maneuver β€” sphincterotomy, stone extraction, stent placement β€” has its own add-on code. Practices that bill only the base ERCP code without stacking the applicable add-ons are undervaluing their most complex cases.

How we help: We review every ERCP procedure note for all interventions performed and apply the complete set of applicable therapeutic add-on codes based on the documented maneuvers, capturing the full billing value of such complex ERCP case.

πŸ’Š

IBD Biologics Authorization Denials

Infliximab, vedolizumab, and other IBD infusion biologics require prior authorization from virtually all commercial payers, including step therapy documentation showing the patient tried and failed conventional treatments. Administering without authorization leaves the practice absorbing the full cost of an expensive drug without reimbursement.

How we help: We manage the full IBD biologics authorization cycle from initial request through renewal, compiling step therapy documentation, tracking authorization expiration, and submitting renewals proactively so no infusion session is administered without confirmed payer approval.

πŸ“‹

Capsule Endoscopy Prior Authorization

Capsule endoscopy frequently requires prior authorization, and payers typically require documentation that conventional endoscopy has been performed and was insufficient, or that there is a specific clinical indication for small bowel imaging that cannot be addressed by standard upper or lower endoscopy. Missing these documentation requirements results in denial.

How we help: We manage capsule endoscopy prior authorization requests including the clinical documentation requirements for each payer, and track approval status before each procedure is scheduled so no study is performed without coverage confirmation.

πŸ’Έ

NCCI Bundling on Same-Day Procedures

When multiple GI procedures are performed in the same session, NCCI edits may bundle certain code combinations. For example, billing both a colonoscopy and a flexible sigmoidoscopy on the same day without proper modifier support results in automatic denial of the lesser-valued code. GI practices with high same-day procedure volumes need systematic bundling review on every claim.

How we help: Every GI claim is reviewed against current NCCI edits before submission. When multiple procedures are legitimately performed and separately billable, we apply the correct modifiers. When bundling applies, we ensure the claim reflects accurate coding that processes correctly the first time.

WHY CHOOSE US

Why GI Practices Choose Theiatrics for Billing

🎯
GI-Specific Coding Expertise Our billing team understands the screening versus diagnostic distinction, polypectomy technique-based add-on codes, ERCP therapeutic stacking, IBD biologics authorization requirements, and the NCCI bundling rules that govern GI procedure billing. We do not apply general billing practices to a specialty that demands this level of code-level specificity.
πŸ“‹
Indication-Based Code Selection We never assign a colonoscopy code by default. Every procedure note is reviewed to confirm the documented indication, the interventions performed, and the removal technique used before a single code is selected. This documentation-first approach eliminates the most common and costly GI billing errors.
βž•
Systematic Add-On Code Capture We build add-on code review into our standard workflow for every endoscopy and colonoscopy claim. No therapeutic procedure leaves our billing queue without being checked for applicable polypectomy, biopsy, or intervention add-on codes that represent legitimate additional revenue for your practice.
⚑
48-Hour Denial Turnaround GI practices perform high volumes of procedures, and denied claims accumulate quickly without a fast resolution process. We address every denied claim within 48 hours, prioritizing therapeutic colonoscopy, ERCP, and IBD infusion claims where delayed resolution has the greatest revenue impact.
πŸ“Š
Procedure-Level Revenue Reporting You receive regular reports on collection rates by procedure type, screening versus diagnostic distribution, polypectomy add-on capture rates, denial root causes, and IBD authorization performance so your practice has complete visibility into where every dollar is coming from and where opportunities remain.

How High-Volume GI Billing Errors Compound

GI billing errors are uniquely dangerous because they compound across volume. A single missed polypectomy add-on code represents a modest billing shortfall on one case. But a GI practice performing 150 colonoscopies per month where 40% involve polypectomy, and the add-on code is routinely missed, is absorbing approximately $60 to $120 in underpayment per affected case. At scale, that represents $36,000 to $72,000 in annual revenue loss from a single missed add-on code applied systematically.

Add screening versus diagnostic miscoding that misclassifies 20% of cases, incomplete ERCP therapeutic add-on billing on complex cases, and IBD infusion denials for missing authorization, and the total annual revenue gap at a mid-size GI practice typically ranges from $100,000 to $300,000. These are not exotic errors. They are exact billing patterns that Theiatrics identifies and corrects in our first 12-month claims audit for every new GI client.

$72K Annual Revenue Lost From Missed Add-On Capture
$300K Potential Annual GI Revenue Gap
98% Clean Claim Rate at First Submission
30% Avg Revenue Increase for New Clients

Ready to Maximize Your GI Practice Revenue?

Let Theiatrics handle the screening versus diagnostic coding, polypectomy add-ons, ERCP therapeutic stacking, IBD biologics authorization, and denial management that high-volume GI billing demands. Start with a free billing review today.

Schedule My Free Audit β†’
COMMON QUESTIONS

Answers to What Gastroenterology Billing Providers Ask Us Most

Answers to the questions GI physicians, practice managers, and billing directors ask us most when evaluating specialized billing support for their gastroenterology practice.

Have a specific question? About your GI practice's billing situation?

πŸ“ž Call Our Billing Team
What are gastroenterology billing services?
+
Gastroenterology billing services refer to specialized medical billing support for GI practices. This includes billing for colonoscopies, upper endoscopies, ERCP, capsule endoscopy, anorectal procedures, liver biopsies, motility studies, IBD biologics infusions, and gastroenterology office visits. GI billing requires expertise in the critical distinction between screening and diagnostic colonoscopy billing, add-on code sequencing for polypectomy and biopsy during endoscopy, prior authorization for high-cost biologics, and the bundling rules that govern GI procedure coding.
What is the difference between screening and diagnostic colonoscopy billing?
+
A screening colonoscopy is performed on an asymptomatic patient as a preventive service and is billed using G0121 (non-high-risk Medicare patients) or G0105 (high-risk Medicare patients). A diagnostic colonoscopy is performed because the patient has symptoms or a positive stool test and is billed using CPT code 45378. When a Medicare screening colonoscopy requires polypectomy, modifier PT is appended to the therapeutic colonoscopy code to preserve the patient's screening benefit and waived cost-sharing. For commercial payers, the policy on screening-to-therapeutic conversions varies by plan and has been changing under federal guidance.
How does polypectomy billing work during colonoscopy?
+
β–Ό When polyps are removed during a colonoscopy, the polypectomy is billed using add-on codes in addition to the base colonoscopy code. The specific add-on code depends on the removal technique documented in the procedure note. Code 45385 is used for snare polypectomy. Code 45380 is used for biopsy by cold biopsy forceps. Code 45384 is used for hot biopsy forceps removal. Code 45388 is used for ablation techniques. Failing to apply these add-on codes, or applying the wrong technique code, is the most common source of revenue leakage in high-volume GI practices.
What is ERCP billing and why is it complex?
+
ERCP billing involves a base diagnostic code (43260) plus additional procedure codes for each therapeutic maneuver performed during the same session. Sphincterotomy is billed with 43262. Stone extraction is billed with 43264. Stent placement into the biliary duct is billed with 43274. Balloon dilation is billed with 43277. Each additional maneuver has its own code that must be stacked on the base code. Missing any applicable add-on results in underpayment on one of the highest-value procedures in gastroenterology. Each code requires clear documentation of what was performed and why.
How are IBD biologics billed in gastroenterology?
+
IBD biologics such as infliximab (J1745), vedolizumab (J3380), and ustekinumab (J3357) are billed using HCPCS J-codes based on the specific drug and dosage administered. The infusion administration is billed separately using CPT code 96413 for the initial hour and 96415 for each additional hour. Prior authorization is required from virtually all commercial payers and must document the Crohn's disease or ulcerative colitis diagnosis, disease severity, and prior treatment failures with conventional therapies including corticosteroids and immunomodulators. Biosimilar versions of reference biologics may have separate J-codes with different coverage policies.
What happens to colonoscopy billing when a patient has a high-deductible plan?
+
For Medicare patients, using modifier PT when a screening colonoscopy converts to a therapeutic procedure generally preserves the patient's preventive benefit and waives cost-sharing for the therapeutic intervention. For commercial plans under high-deductible coverage, the rules vary by plan and state. Some plans continue to apply the screening benefit even when polyps are found, while others reclassify the visit as diagnostic and apply deductible and coinsurance. Federal guidance has been moving toward prohibiting the reclassification that results in surprise bills, but payer compliance varies. Theiatrics applies the payer-specific approach and advises patients appropriately before procedures when possible.
Does Theiatrics handle both GI endoscopy and hepatology billing?
+
Yes. Theiatrics handles billing for the full scope of gastroenterology services including upper and lower GI endoscopy, ERCP, capsule endoscopy, anorectal procedures, and office-based GI visits, as well as hepatology services including liver biopsy, hepatitis treatment monitoring, cirrhosis management, and IBD biologics infusion billing. We manage both procedure-heavy endoscopy billing and chronic disease management billing for practices with combined GI and hepatology patient populations.
Which states does Theiatrics provide gastroenterology billing services in?
+
Theiatrics provides gastroenterology billing services for GI practices in all 50 states. Our team understands state-specific Medicaid GI coverage policies, regional MAC LCD requirements for GI procedures including capsule endoscopy, and commercial payer prior authorization processes for IBD biologics that vary by market and affect how gastroenterology claims are processed and reimbursed across the country.
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πŸ”
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βš–οΈ
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πŸ’°
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⚑
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